Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb3Q91XZ7 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm25318-201ENSMUST00000122554 314 ntBASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb3Q91XZ7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb3Q91XZ7 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm38217-201ENSMUST00000194358 910 ntBASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdhb3Q91XZ7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms