Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga4Q91XY4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm29649-201ENSMUST00000185649 419 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga4Q91XY4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gm24196-201ENSMUST00000179161 110 ntBASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga4Q91XY4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms