Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gm15808-201ENSMUST00000119046 604 ntBASIC15.06■□□□□ 0
Shisa4Q8CA71 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gm8738-201ENSMUST00000172606 329 ntBASIC15.06■□□□□ 0
Shisa4Q8CA71 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.06■□□□□ 0
Shisa4Q8CA71 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.06■□□□□ 0
Shisa4Q8CA71 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shisa4Q8CA71 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shisa4Q8CA71 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.06■□□□□ 0
Shisa4Q8CA71 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shisa4Q8CA71 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.05■□□□□ 0
Shisa4Q8CA71 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.05■□□□□ 0
Shisa4Q8CA71 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Shisa4Q8CA71 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shisa4Q8CA71 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shisa4Q8CA71 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Shisa4Q8CA71 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.05■□□□□ -0
Shisa4Q8CA71 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm27501-201ENSMUST00000183599 107 ntBASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm27516-201ENSMUST00000184237 98 ntBASIC15.05■□□□□ -0
Shisa4Q8CA71 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shisa4Q8CA71 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shisa4Q8CA71 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.05■□□□□ -0
Shisa4Q8CA71 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shisa4Q8CA71 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Shisa4Q8CA71 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.04■□□□□ -0
Shisa4Q8CA71 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Gm11793-201ENSMUST00000120433 981 ntBASIC15.04■□□□□ -0
Shisa4Q8CA71 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shisa4Q8CA71 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shisa4Q8CA71 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms