Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Gm9996-201ENSMUST00000070359 913 ntBASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col16a1Q8BLX7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Gm12029-201ENSMUST00000120073 832 ntBASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Gm27530-201ENSMUST00000184096 98 ntBASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col16a1Q8BLX7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Mir6958-201ENSMUST00000184207 73 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm28071-201ENSMUST00000190355 478 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms