Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Gm15371-201ENSMUST00000117057 784 ntBASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Gm45841-201ENSMUST00000207700 164 ntBASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc40Q8BI79 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gm12341-201ENSMUST00000119724 503 ntBASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Mir7221-201ENSMUST00000184009 72 ntBASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc40Q8BI79 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms