Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm18038-201ENSMUST00000197900 485 ntBASIC15.03■□□□□ -0
Scn9aQ62205 Gm43962-201ENSMUST00000203898 190 ntBASIC15.03■□□□□ -0
Scn9aQ62205 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Gm25517-201ENSMUST00000083865 134 ntBASIC15.03■□□□□ -0
Scn9aQ62205 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scn9aQ62205 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.03■□□□□ -0
Scn9aQ62205 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Gm15881-201ENSMUST00000148792 942 ntBASIC15.02■□□□□ -0
Scn9aQ62205 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Gm28071-201ENSMUST00000190355 478 ntBASIC15.02■□□□□ -0
Scn9aQ62205 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.02■□□□□ -0
Scn9aQ62205 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scn9aQ62205 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn9aQ62205 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn9aQ62205 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Gm37246-201ENSMUST00000192665 835 ntBASIC15.02□□□□□ -0.01
Scn9aQ62205 Gm42937-201ENSMUST00000197360 752 ntBASIC15.02□□□□□ -0.01
Scn9aQ62205 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.02□□□□□ -0.01
Scn9aQ62205 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Scn9aQ62205 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn9aQ62205 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.01□□□□□ -0.01
Scn9aQ62205 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.01□□□□□ -0.01
Scn9aQ62205 Gm10076-201ENSMUST00000073238 384 ntBASIC15.01□□□□□ -0.01
Scn9aQ62205 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scn9aQ62205 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn9aQ62205 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn9aQ62205 Gm19863-201ENSMUST00000192480 2218 ntBASIC15□□□□□ -0.01
Scn9aQ62205 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn9aQ62205 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn9aQ62205 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15□□□□□ -0.01
Scn9aQ62205 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15□□□□□ -0.01
Scn9aQ62205 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms