Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Syne3Q4FZC9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Mir874-201ENSMUST00000104769 76 ntBASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne3Q4FZC9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Syne3Q4FZC9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.83□□□□□ -0.19
Syne3Q4FZC9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Syne3Q4FZC9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm6152-201ENSMUST00000151704 340 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm8463-201ENSMUST00000208573 613 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm18473-201ENSMUST00000220543 868 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne3Q4FZC9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm45841-201ENSMUST00000207700 164 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms