Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.84□□□□□ -0.67
Tff1Q08423 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Tff1Q08423 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.84□□□□□ -0.67
Tff1Q08423 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Tff1Q08423 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Gm21854-201ENSMUST00000179901 471 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Gm27892-201ENSMUST00000185017 106 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Gm18905-201ENSMUST00000205454 928 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tff1Q08423 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.84□□□□□ -0.67
Tff1Q08423 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tff1Q08423 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tff1Q08423 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.84□□□□□ -0.67
Tff1Q08423 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Tff1Q08423 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tff1Q08423 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Tff1Q08423 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tff1Q08423 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.83□□□□□ -0.68
Tff1Q08423 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Tff1Q08423 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.83□□□□□ -0.68
Tff1Q08423 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.83□□□□□ -0.68
Tff1Q08423 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.83□□□□□ -0.68
Tff1Q08423 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.83□□□□□ -0.68
Tff1Q08423 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Tff1Q08423 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.83□□□□□ -0.68
Tff1Q08423 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tff1Q08423 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.83□□□□□ -0.68
Tff1Q08423 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms