Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Lbx1P52955 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lbx1P52955 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.59□□□□□ -0.39
Lbx1P52955 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.59□□□□□ -0.39
Lbx1P52955 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lbx1P52955 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.59□□□□□ -0.39
Lbx1P52955 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.59□□□□□ -0.39
Lbx1P52955 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.59□□□□□ -0.39
Lbx1P52955 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.59□□□□□ -0.39
Lbx1P52955 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.59□□□□□ -0.39
Lbx1P52955 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.59□□□□□ -0.39
Lbx1P52955 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.59□□□□□ -0.39
Lbx1P52955 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lbx1P52955 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.58□□□□□ -0.39
Lbx1P52955 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Lbx1P52955 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.58□□□□□ -0.4
Lbx1P52955 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm23949-201ENSMUST00000104027 127 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Gm12899-201ENSMUST00000120565 551 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Gm12516-201ENSMUST00000120819 385 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm32999-201ENSMUST00000192693 562 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lbx1P52955 Gm32025-201ENSMUST00000217960 307 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Lbx1P52955 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Snora73b-201ENSMUST00000083419 205 ntBASIC12.58□□□□□ -0.4
Lbx1P52955 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms