Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hnf4aP49698 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Hnf4aP49698 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hnf4aP49698 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hnf4aP49698 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm14928-201ENSMUST00000120198 477 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm27701-201ENSMUST00000184498 110 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.63□□□□□ -0.39
Hnf4aP49698 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm16372-201ENSMUST00000073088 450 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Hnf4aP49698 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.63□□□□□ -0.39
Hnf4aP49698 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hnf4aP49698 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Gm2495-201ENSMUST00000191160 466 ntBASIC12.62□□□□□ -0.39
Hnf4aP49698 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.62□□□□□ -0.39
Hnf4aP49698 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.62□□□□□ -0.39
Hnf4aP49698 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Hnf4aP49698 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hnf4aP49698 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hnf4aP49698 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms