Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm7730-201ENSMUST00000212486 454 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox5P35710 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.21□□□□□ -0.13
Sox5P35710 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.21□□□□□ -0.13
Sox5P35710 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox5P35710 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Gm5354-201ENSMUST00000182417 973 ntBASIC14.21□□□□□ -0.13
Sox5P35710 Mir6956-201ENSMUST00000183598 62 ntBASIC14.21□□□□□ -0.13
Sox5P35710 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Sox5P35710 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.21□□□□□ -0.13
Sox5P35710 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox5P35710 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox5P35710 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox5P35710 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox5P35710 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox5P35710 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox5P35710 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sox5P35710 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.21□□□□□ -0.14
Sox5P35710 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.21□□□□□ -0.14
Sox5P35710 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox5P35710 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sox5P35710 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox5P35710 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox5P35710 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox5P35710 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Mir8102-201ENSMUST00000184148 139 ntBASIC14.2□□□□□ -0.14
Sox5P35710 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.2□□□□□ -0.14
Sox5P35710 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox5P35710 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox5P35710 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox5P35710 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox5P35710 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox5P35710 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox5P35710 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox5P35710 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox5P35710 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox5P35710 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.19□□□□□ -0.14
Sox5P35710 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.19□□□□□ -0.14
Sox5P35710 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.19□□□□□ -0.14
Sox5P35710 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms