Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 Gm14719-201ENSMUST00000121891 340 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Gm9726-201ENSMUST00000180321 678 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Gm2423-201ENSMUST00000074863 733 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Cdx1P18111 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdx1P18111 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdx1P18111 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.55□□□□□ -0.72
Cdx1P18111 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx1P18111 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cdx1P18111 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Cdx1P18111 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cdx1P18111 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm9719-201ENSMUST00000162765 543 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cdx1P18111 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Syt7-204ENSMUST00000223586 1344 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.54□□□□□ -0.72
Cdx1P18111 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx1P18111 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx1P18111 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.53□□□□□ -0.72
Cdx1P18111 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdx1P18111 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx1P18111 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx1P18111 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx1P18111 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx1P18111 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdx1P18111 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cdx1P18111 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdx1P18111 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms