Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Msx1P13297 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Gm14579-201ENSMUST00000117068 283 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm1335-201ENSMUST00000121653 386 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm10156-201ENSMUST00000122364 462 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm24380-201ENSMUST00000122696 324 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Msx1P13297 Gm27501-201ENSMUST00000183599 107 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm5708-201ENSMUST00000196289 886 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm43118-201ENSMUST00000199149 775 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm42550-201ENSMUST00000201553 960 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.47□□□□□ -0.41
Msx1P13297 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Msx1P13297 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Msx1P13297 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx1P13297 Gm45930-201ENSMUST00000221330 292 ntBASIC12.47□□□□□ -0.41
Msx1P13297 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Msx1P13297 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Msx1P13297 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.47□□□□□ -0.41
Msx1P13297 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx1P13297 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.47□□□□□ -0.41
Msx1P13297 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx1P13297 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Msx1P13297 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Msx1P13297 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Gm13342-201ENSMUST00000121055 207 ntBASIC12.46□□□□□ -0.41
Msx1P13297 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.46□□□□□ -0.41
Msx1P13297 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Gm29199-201ENSMUST00000187766 775 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Gm37008-201ENSMUST00000195712 319 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Gm42627-201ENSMUST00000197347 224 ntBASIC12.46□□□□□ -0.41
Msx1P13297 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.46□□□□□ -0.41
Msx1P13297 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx1P13297 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Msx1P13297 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx1P13297 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx1P13297 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Msx1P13297 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Msx1P13297 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.46□□□□□ -0.42
Msx1P13297 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.46□□□□□ -0.42
Msx1P13297 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx1P13297 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Msx1P13297 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Msx1P13297 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Msx1P13297 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.45□□□□□ -0.42
Msx1P13297 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.45□□□□□ -0.42
Msx1P13297 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx1P13297 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.45□□□□□ -0.42
Msx1P13297 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.45□□□□□ -0.42
Msx1P13297 Gm4271-201ENSMUST00000174444 973 ntBASIC12.45□□□□□ -0.42
Msx1P13297 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.45□□□□□ -0.42
Msx1P13297 Gm37709-201ENSMUST00000195074 600 ntBASIC12.45□□□□□ -0.42
Msx1P13297 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.45□□□□□ -0.42
Msx1P13297 AC154616.1-201ENSMUST00000226995 804 ntBASIC12.45□□□□□ -0.42
Msx1P13297 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms