Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh3P10287 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdh3P10287 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.47
Cdh3P10287 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh3P10287 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.08□□□□□ -0.48
Cdh3P10287 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cdh3P10287 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh3P10287 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm15240-201ENSMUST00000118156 720 ntBASIC12.08□□□□□ -0.48
Cdh3P10287 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Cdh3P10287 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm24420-201ENSMUST00000176676 59 ntBASIC12.08□□□□□ -0.48
Cdh3P10287 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh3P10287 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.08□□□□□ -0.48
Cdh3P10287 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh3P10287 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh3P10287 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh3P10287 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh3P10287 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh3P10287 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.07□□□□□ -0.48
Cdh3P10287 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdh3P10287 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Cdh3P10287 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm25927-201ENSMUST00000175058 117 ntBASIC12.07□□□□□ -0.48
Cdh3P10287 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.07□□□□□ -0.48
Cdh3P10287 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh3P10287 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh3P10287 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh3P10287 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms