Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nid2O88322 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Gm42937-201ENSMUST00000197360 752 ntBASIC16.71■□□□□ 0.27
Nid2O88322 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nid2O88322 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nid2O88322 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nid2O88322 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Nid2O88322 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nid2O88322 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Nid2O88322 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Gm23251-201ENSMUST00000103773 110 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Mir874-201ENSMUST00000104769 76 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nid2O88322 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Gm12165-201ENSMUST00000117047 342 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.7■□□□□ 0.26
Nid2O88322 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.7■□□□□ 0.26
Nid2O88322 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.7■□□□□ 0.26
Nid2O88322 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.7■□□□□ 0.26
Nid2O88322 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.7■□□□□ 0.26
Nid2O88322 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.7■□□□□ 0.26
Nid2O88322 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nid2O88322 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nid2O88322 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.69■□□□□ 0.26
Nid2O88322 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Mir6546-201ENSMUST00000184460 62 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm7593-201ENSMUST00000187246 644 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm9540-201ENSMUST00000188230 478 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm43962-201ENSMUST00000203898 190 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm43916-201ENSMUST00000205062 967 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Gm10752-201ENSMUST00000218348 729 ntBASIC16.69■□□□□ 0.26
Nid2O88322 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nid2O88322 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nid2O88322 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nid2O88322 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.68■□□□□ 0.26
Nid2O88322 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms