Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.58□□□□□ -0.56
Col5a1O88207 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm19287-201ENSMUST00000203190 358 ntBASIC11.58□□□□□ -0.56
Col5a1O88207 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm19994-201ENSMUST00000217086 586 ntBASIC11.58□□□□□ -0.56
Col5a1O88207 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.58□□□□□ -0.56
Col5a1O88207 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.58□□□□□ -0.56
Col5a1O88207 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.58□□□□□ -0.56
Col5a1O88207 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.58□□□□□ -0.56
Col5a1O88207 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.58□□□□□ -0.56
Col5a1O88207 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.58□□□□□ -0.56
Col5a1O88207 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col5a1O88207 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col5a1O88207 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.57□□□□□ -0.56
Col5a1O88207 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col5a1O88207 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Col5a1O88207 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.57□□□□□ -0.56
Col5a1O88207 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col5a1O88207 Gm12795-201ENSMUST00000117594 539 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm12380-201ENSMUST00000119012 544 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm12029-201ENSMUST00000120073 832 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm12266-201ENSMUST00000120311 962 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col5a1O88207 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm37666-201ENSMUST00000194110 866 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.57□□□□□ -0.56
Col5a1O88207 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.57□□□□□ -0.56
Col5a1O88207 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col5a1O88207 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Col5a1O88207 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col5a1O88207 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.57□□□□□ -0.56
Col5a1O88207 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col5a1O88207 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.57□□□□□ -0.56
Col5a1O88207 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.56□□□□□ -0.56
Col5a1O88207 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.56□□□□□ -0.56
Col5a1O88207 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Gm9062-201ENSMUST00000117712 727 ntBASIC11.56□□□□□ -0.56
Col5a1O88207 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Col5a1O88207 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.56□□□□□ -0.56
Col5a1O88207 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col5a1O88207 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col5a1O88207 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms