Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd2Q99JR8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd2Q99JR8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd2Q99JR8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd2Q99JR8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.15□□□□□ -0.31
Smarcd2Q99JR8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcd2Q99JR8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Gm13570-201ENSMUST00000140763 309 ntBASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Mir3547-201ENSMUST00000175461 88 ntBASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd2Q99JR8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm14028-201ENSMUST00000117434 479 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm4909-201ENSMUST00000118749 794 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm14109-201ENSMUST00000118814 309 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm14277-201ENSMUST00000121195 360 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm45925-201ENSMUST00000218882 744 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms