Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf8Q8VC56 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm18624-201ENSMUST00000220966 658 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Paupar-201ENSMUST00000194826 3482 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms