Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc58Q8R3Q6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm12585-201ENSMUST00000117307 290 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24158-201ENSMUST00000175263 71 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc58Q8R3Q6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Mir1897-201ENSMUST00000122581 272 ntBASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc58Q8R3Q6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms