Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.7□□□□□ -0.06
Syne4Q8CII8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Syne4Q8CII8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Syne4Q8CII8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Syne4Q8CII8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm13611-201ENSMUST00000118269 318 ntBASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm27552-201ENSMUST00000183351 62 ntBASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm27844-201ENSMUST00000183613 62 ntBASIC14.69□□□□□ -0.06
Syne4Q8CII8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.69□□□□□ -0.06
Syne4Q8CII8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Syne4Q8CII8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm15782-201ENSMUST00000121073 445 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm3508-201ENSMUST00000186012 792 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm7003-201ENSMUST00000195089 312 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Syne4Q8CII8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.68□□□□□ -0.06
Syne4Q8CII8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms