Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Gm8805-201ENSMUST00000117848 313 ntBASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Gm11814-201ENSMUST00000119515 929 ntBASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim9Q8C7M3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm5035-201ENSMUST00000215581 927 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim9Q8C7M3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms