Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm11531-201ENSMUST00000117614 555 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm42997-202ENSMUST00000200321 985 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Gm5051-201ENSMUST00000204085 485 ntBASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a6Q8C6K9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm13813-201ENSMUST00000120998 787 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm7848-201ENSMUST00000210739 718 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms