Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gm11450-201ENSMUST00000121144 333 ntBASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gm37666-201ENSMUST00000194110 866 ntBASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Gm45925-201ENSMUST00000218882 744 ntBASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fam196aQ3USH1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm14460-201ENSMUST00000121511 639 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm6963-201ENSMUST00000147879 379 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm29615-201ENSMUST00000185371 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28224-201ENSMUST00000186078 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm29001-201ENSMUST00000186177 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28292-201ENSMUST00000186593 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28101-201ENSMUST00000187608 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm29076-201ENSMUST00000187689 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28302-201ENSMUST00000187931 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28646-201ENSMUST00000188220 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28205-201ENSMUST00000189177 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm29032-201ENSMUST00000189797 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm28695-201ENSMUST00000190300 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm37448-201ENSMUST00000192795 697 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm4607-201ENSMUST00000206649 577 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms