Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gm10608-202ENSMUST00000213924 676 ntBASIC13.25□□□□□ -0.29
Ebf1Q07802 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm8805-201ENSMUST00000117848 313 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm14381-201ENSMUST00000122105 414 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.24□□□□□ -0.29
Ebf1Q07802 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm38158-201ENSMUST00000194617 339 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm44069-201ENSMUST00000204898 506 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm7046-201ENSMUST00000221351 977 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.24□□□□□ -0.29
Ebf1Q07802 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ebf1Q07802 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf1Q07802 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ebf1Q07802 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm15370-201ENSMUST00000117158 253 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm6023-201ENSMUST00000118217 606 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm11591-201ENSMUST00000120063 702 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm2991-201ENSMUST00000173338 480 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm6222-202ENSMUST00000182143 629 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm6621-201ENSMUST00000193251 772 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.23□□□□□ -0.29
Ebf1Q07802 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ebf1Q07802 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms