Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm27682-201ENSMUST00000183930 110 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm42693-201ENSMUST00000196779 631 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx3-2P97503 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.35□□□□□ -0.43
Nkx3-2P97503 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm14350-201ENSMUST00000116642 640 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm44069-201ENSMUST00000204898 506 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.34□□□□□ -0.43
Nkx3-2P97503 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx3-2P97503 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx3-2P97503 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms