Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.49■□□□□ 0.39
Nphp4P59240 Gm19994-201ENSMUST00000217086 586 ntBASIC17.49■□□□□ 0.39
Nphp4P59240 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.49■□□□□ 0.39
Nphp4P59240 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Gm43858-201ENSMUST00000199418 1778 ntBASIC17.49■□□□□ 0.39
Nphp4P59240 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nphp4P59240 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Nphp4P59240 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nphp4P59240 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Gm23119-201ENSMUST00000158610 140 ntBASIC17.48■□□□□ 0.39
Nphp4P59240 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Gm9678-201ENSMUST00000198979 1149 ntBASIC17.48■□□□□ 0.39
Nphp4P59240 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Nphp4P59240 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.48■□□□□ 0.39
Nphp4P59240 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nphp4P59240 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.48■□□□□ 0.39
Nphp4P59240 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp4P59240 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm12015-201ENSMUST00000117065 843 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm16505-201ENSMUST00000179981 232 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Gm28882-201ENSMUST00000185504 314 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Gm42937-201ENSMUST00000197360 752 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp4P59240 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp4P59240 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nphp4P59240 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 AC151895.1-201ENSMUST00000219025 1742 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp4P59240 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.47■□□□□ 0.39
Nphp4P59240 Rmrp-201ENSMUST00000157463 271 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Gm16570-201ENSMUST00000161951 436 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.47■□□□□ 0.39
Nphp4P59240 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm27341-201ENSMUST00000183570 106 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.47■□□□□ 0.39
Nphp4P59240 AL732506.1-201ENSMUST00000226420 281 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp4P59240 Gm10076-201ENSMUST00000073238 384 ntBASIC17.47■□□□□ 0.39
Nphp4P59240 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.46■□□□□ 0.39
Nphp4P59240 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Gm43908-201ENSMUST00000205074 1472 ntBASIC17.46■□□□□ 0.39
Nphp4P59240 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nphp4P59240 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nphp4P59240 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Nphp4P59240 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp4P59240 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms