Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BdnfP21237 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BdnfP21237 Gm21854-201ENSMUST00000179901 471 ntBASIC12.55□□□□□ -0.4
BdnfP21237 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.55□□□□□ -0.4
BdnfP21237 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.55□□□□□ -0.4
BdnfP21237 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BdnfP21237 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.55□□□□□ -0.4
BdnfP21237 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.54□□□□□ -0.4
BdnfP21237 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.54□□□□□ -0.4
BdnfP21237 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.54□□□□□ -0.4
BdnfP21237 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.54□□□□□ -0.4
BdnfP21237 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Gm17330-201ENSMUST00000221047 165 ntBASIC12.54□□□□□ -0.4
BdnfP21237 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.54□□□□□ -0.4
BdnfP21237 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
BdnfP21237 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.54□□□□□ -0.4
BdnfP21237 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BdnfP21237 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
BdnfP21237 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BdnfP21237 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
BdnfP21237 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
BdnfP21237 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.53□□□□□ -0.4
BdnfP21237 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BdnfP21237 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.53□□□□□ -0.4
BdnfP21237 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.53□□□□□ -0.4
BdnfP21237 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
BdnfP21237 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.53□□□□□ -0.4
BdnfP21237 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BdnfP21237 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms