Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm14832-201ENSMUST00000121289 322 ntBASIC16.8■□□□□ 0.28
Hoxc9P09633 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxc9P09633 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.8■□□□□ 0.28
Hoxc9P09633 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.8■□□□□ 0.28
Hoxc9P09633 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.8■□□□□ 0.28
Hoxc9P09633 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hoxc9P09633 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.8■□□□□ 0.28
Hoxc9P09633 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.79■□□□□ 0.28
Hoxc9P09633 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Hoxc9P09633 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Gm13996-201ENSMUST00000118456 430 ntBASIC16.79■□□□□ 0.28
Hoxc9P09633 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.79■□□□□ 0.28
Hoxc9P09633 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.79■□□□□ 0.28
Hoxc9P09633 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.79■□□□□ 0.28
Hoxc9P09633 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Hoxc9P09633 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hoxc9P09633 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Hoxc9P09633 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hoxc9P09633 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc9P09633 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Hoxc9P09633 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm23200-201ENSMUST00000104379 132 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm14999-201ENSMUST00000121039 624 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm12566-201ENSMUST00000121479 359 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.78■□□□□ 0.28
Hoxc9P09633 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm19208-201ENSMUST00000213861 912 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm39404-201ENSMUST00000216350 313 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hoxc9P09633 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.78■□□□□ 0.28
Hoxc9P09633 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.77■□□□□ 0.28
Hoxc9P09633 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hoxc9P09633 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.77■□□□□ 0.28
Hoxc9P09633 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hoxc9P09633 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Gm8913-201ENSMUST00000209491 641 ntBASIC16.77■□□□□ 0.28
Hoxc9P09633 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Hoxc9P09633 Gzmn-202ENSMUST00000225535 989 ntBASIC16.77■□□□□ 0.28
Hoxc9P09633 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms