Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm11478-201ENSMUST00000117851 599 ntBASIC11.22□□□□□ -0.61
H3f3cP02301 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H3f3cP02301 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.22□□□□□ -0.61
H3f3cP02301 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
H3f3cP02301 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.22□□□□□ -0.61
H3f3cP02301 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.22□□□□□ -0.61
H3f3cP02301 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.22□□□□□ -0.61
H3f3cP02301 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.22□□□□□ -0.61
H3f3cP02301 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
H3f3cP02301 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
H3f3cP02301 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gm5356-201ENSMUST00000093326 615 ntBASIC11.22□□□□□ -0.61
H3f3cP02301 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
H3f3cP02301 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3cP02301 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.21□□□□□ -0.61
H3f3cP02301 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
H3f3cP02301 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Gm6447-201ENSMUST00000118905 835 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.21□□□□□ -0.61
H3f3cP02301 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.21□□□□□ -0.61
H3f3cP02301 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.21□□□□□ -0.61
H3f3cP02301 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H3f3cP02301 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Gm38671-201ENSMUST00000200573 130 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
H3f3cP02301 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Gm10012-201ENSMUST00000078252 192 ntBASIC11.21□□□□□ -0.61
H3f3cP02301 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H3f3cP02301 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
H3f3cP02301 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.21□□□□□ -0.61
H3f3cP02301 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.21□□□□□ -0.62
H3f3cP02301 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.21□□□□□ -0.62
H3f3cP02301 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.21□□□□□ -0.62
H3f3cP02301 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
H3f3cP02301 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H3f3cP02301 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
H3f3cP02301 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H3f3cP02301 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H3f3cP02301 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H3f3cP02301 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H3f3cP02301 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H3f3cP02301 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms