Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Syn1O88935 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Syn1O88935 Gm13888-201ENSMUST00000119148 422 ntBASIC13.42□□□□□ -0.26
Syn1O88935 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.42□□□□□ -0.26
Syn1O88935 Gm45224-201ENSMUST00000208203 414 ntBASIC13.42□□□□□ -0.26
Syn1O88935 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.42□□□□□ -0.26
Syn1O88935 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Syn1O88935 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Syn1O88935 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syn1O88935 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syn1O88935 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Syn1O88935 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.41□□□□□ -0.26
Syn1O88935 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Syn1O88935 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.41□□□□□ -0.26
Syn1O88935 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.41□□□□□ -0.26
Syn1O88935 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.41□□□□□ -0.26
Syn1O88935 Gm18893-201ENSMUST00000198416 943 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Gm9555-201ENSMUST00000200908 583 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.41□□□□□ -0.26
Syn1O88935 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Gm45433-201ENSMUST00000209386 247 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Gm8913-201ENSMUST00000209491 641 ntBASIC13.41□□□□□ -0.26
Syn1O88935 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.41□□□□□ -0.26
Syn1O88935 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Syn1O88935 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.41□□□□□ -0.26
Syn1O88935 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Syn1O88935 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Syn1O88935 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Syn1O88935 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.41□□□□□ -0.26
Syn1O88935 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.41□□□□□ -0.26
Syn1O88935 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Syn1O88935 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Syn1O88935 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.4□□□□□ -0.26
Syn1O88935 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.4□□□□□ -0.26
Syn1O88935 Gm9540-201ENSMUST00000188230 478 ntBASIC13.4□□□□□ -0.26
Syn1O88935 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.4□□□□□ -0.26
Syn1O88935 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.4□□□□□ -0.26
Syn1O88935 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Gm4607-201ENSMUST00000206649 577 ntBASIC13.4□□□□□ -0.26
Syn1O88935 Gm7600-201ENSMUST00000209657 785 ntBASIC13.4□□□□□ -0.26
Syn1O88935 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.4□□□□□ -0.26
Syn1O88935 Gm32025-201ENSMUST00000217960 307 ntBASIC13.4□□□□□ -0.26
Syn1O88935 Gm10752-201ENSMUST00000218348 729 ntBASIC13.4□□□□□ -0.26
Syn1O88935 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.4□□□□□ -0.26
Syn1O88935 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Syn1O88935 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Syn1O88935 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms