Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.52□□□□□ -0.41
Hcn1O88704 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.52□□□□□ -0.41
Hcn1O88704 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.52□□□□□ -0.41
Hcn1O88704 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcn1O88704 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcn1O88704 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hcn1O88704 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcn1O88704 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hcn1O88704 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm11478-201ENSMUST00000117851 599 ntBASIC12.51□□□□□ -0.41
Hcn1O88704 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.51□□□□□ -0.41
Hcn1O88704 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm15429-201ENSMUST00000151268 798 ntBASIC12.51□□□□□ -0.41
Hcn1O88704 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.51□□□□□ -0.41
Hcn1O88704 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.51□□□□□ -0.41
Hcn1O88704 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.51□□□□□ -0.41
Hcn1O88704 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hcn1O88704 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hcn1O88704 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hcn1O88704 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hcn1O88704 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.51□□□□□ -0.41
Hcn1O88704 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hcn1O88704 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hcn1O88704 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.5□□□□□ -0.41
Hcn1O88704 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.5□□□□□ -0.41
Hcn1O88704 Gm2495-201ENSMUST00000191160 466 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 Gm17330-201ENSMUST00000221047 165 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.5□□□□□ -0.41
Hcn1O88704 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.5□□□□□ -0.41
Hcn1O88704 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hcn1O88704 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.5□□□□□ -0.41
Hcn1O88704 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Hcn1O88704 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hcn1O88704 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms