Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfrsf11aO35305 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf11aO35305 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Snord83b-201ENSMUST00000104546 94 ntBASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gm13829-201ENSMUST00000119600 138 ntBASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf11aO35305 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm12363-201ENSMUST00000122250 668 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm27682-201ENSMUST00000183930 110 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf11aO35305 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf11aO35305 Gm4984-201ENSMUST00000115987 360 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms