Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm29608-201ENSMUST00000190444 463 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm29705-201ENSMUST00000212598 474 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm26315-201ENSMUST00000083890 321 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp35M0QWN7 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.05□□□□□ -0.16
Usp35M0QWN7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Mir1247-201ENSMUST00000116706 82 ntBASIC14.04□□□□□ -0.16
Usp35M0QWN7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Gm27514-201ENSMUST00000183692 110 ntBASIC14.04□□□□□ -0.16
Usp35M0QWN7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.04□□□□□ -0.16
Usp35M0QWN7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.04□□□□□ -0.16
Usp35M0QWN7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp35M0QWN7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Gm5187-201ENSMUST00000117317 991 ntBASIC14.03□□□□□ -0.16
Usp35M0QWN7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.03□□□□□ -0.16
Usp35M0QWN7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.03□□□□□ -0.16
Usp35M0QWN7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.03□□□□□ -0.16
Usp35M0QWN7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp35M0QWN7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms