Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm22133-201ENSMUST00000102082 109 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Mir483-201ENSMUST00000093631 73 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm13142-201ENSMUST00000117213 1453 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Mir671-201ENSMUST00000102432 98 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm17831-201ENSMUST00000205579 900 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm8894-201ENSMUST00000074642 666 ntBASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.5■□□□□ 0.39
Zc3h13E9Q784 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Gm42779-201ENSMUST00000198807 406 ntBASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zc3h13E9Q784 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.49■□□□□ 0.39
Zc3h13E9Q784 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Gm5852-201ENSMUST00000194119 1021 ntBASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Gm5542-201ENSMUST00000195485 1089 ntBASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Gm6722-201ENSMUST00000221586 390 ntBASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zc3h13E9Q784 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Zc3h13E9Q784 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms