Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 ELK2AP-201ENST00000392510 1007 ntBASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC007969.1-201ENST00000433675 447 ntBASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC138951.2-201ENST00000623455 1161 ntBASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 AL008638.5-201ENST00000623814 1298 ntBASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 SLC25A24P2-201ENST00000415059 510 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AL591846.1-201ENST00000451736 433 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 IGHJ2P-201ENST00000454480 60 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AL021578.1-201ENST00000613646 709 ntBASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LOC102724428A0A0B4J2F2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 MIR4741-201ENST00000579822 90 ntBASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC005695.3-201ENST00000614522 232 ntBASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 AP005019.2-201ENST00000615104 511 ntBASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LOC102724428A0A0B4J2F2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms