Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Raf1Q99N57 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Raf1Q99N57 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Raf1Q99N57 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Raf1Q99N57 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm43703-201ENSMUST00000200523 763 ntBASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.78□□□□□ -0.52
Raf1Q99N57 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.78□□□□□ -0.52
Raf1Q99N57 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Raf1Q99N57 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.78□□□□□ -0.52
Raf1Q99N57 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Raf1Q99N57 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raf1Q99N57 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.77□□□□□ -0.52
Raf1Q99N57 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Raf1Q99N57 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Raf1Q99N57 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raf1Q99N57 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm22189-201ENSMUST00000103822 86 ntBASIC11.77□□□□□ -0.53
Raf1Q99N57 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm9522-201ENSMUST00000182394 926 ntBASIC11.77□□□□□ -0.53
Raf1Q99N57 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Raf1Q99N57 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raf1Q99N57 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms