Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm14058-201ENSMUST00000116082 735 ntBASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm12015-201ENSMUST00000117065 843 ntBASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm28071-201ENSMUST00000190355 478 ntBASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm14999-201ENSMUST00000121039 624 ntBASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm7666-201ENSMUST00000146631 819 ntBASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ddx54Q8K4L0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 AC174797.2-202ENSMUST00000225729 568 ntBASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ddx54Q8K4L0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 AY036118-201ENSMUST00000200021 923 ntBASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ddx54Q8K4L0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx54Q8K4L0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx54Q8K4L0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx54Q8K4L0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Ddx54Q8K4L0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms