Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.84□□□□□ -0.19
Rd3Q8BRE0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.84□□□□□ -0.19
Rd3Q8BRE0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.83□□□□□ -0.19
Rd3Q8BRE0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rd3Q8BRE0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rd3Q8BRE0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rd3Q8BRE0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rd3Q8BRE0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm10434-201ENSMUST00000101158 471 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm11978-201ENSMUST00000122315 466 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm25668-201ENSMUST00000157700 129 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm16570-201ENSMUST00000161951 436 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Mir3102-201ENSMUST00000175555 104 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rd3Q8BRE0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rd3Q8BRE0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms