Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm25116-201ENSMUST00000157191 122 ntBASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm6222-202ENSMUST00000182143 629 ntBASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Mir877-201ENSMUST00000104738 85 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm15370-201ENSMUST00000117158 253 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm26083-201ENSMUST00000157904 193 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.12□□□□□ -0.47
Pif1Q80SX8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pif1Q80SX8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm6023-201ENSMUST00000118217 606 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms