Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc88cQ6VGS5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm22323-201ENSMUST00000103832 109 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm3961-201ENSMUST00000204425 994 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc88cQ6VGS5 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Gm30285-201ENSMUST00000214614 422 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc88cQ6VGS5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms