Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-3Q5R1C3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm11543-201ENSMUST00000120758 370 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm5479-201ENSMUST00000160578 435 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm10275-202ENSMUST00000168697 495 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm18733-201ENSMUST00000173950 856 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm5177-201ENSMUST00000183092 997 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm2651-201ENSMUST00000203560 838 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm10275-201ENSMUST00000092620 635 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 BC043934-202ENSMUST00000185694 2356 ntBASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-3Q5R1C3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3-3Q5R1C3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms