Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm14130-201ENSMUST00000118417 987 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm14832-201ENSMUST00000121289 322 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm45925-201ENSMUST00000218882 744 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.32■□□□□ 0.2
Nkx2-3P97334 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-3P97334 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.31■□□□□ 0.2
Nkx2-3P97334 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.31■□□□□ 0.2
Nkx2-3P97334 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.31■□□□□ 0.2
Nkx2-3P97334 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Nkx2-3P97334 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.3■□□□□ 0.2
Nkx2-3P97334 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm11597-201ENSMUST00000121423 964 ntBASIC16.3■□□□□ 0.2
Nkx2-3P97334 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.3■□□□□ 0.2
Nkx2-3P97334 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm18212-201ENSMUST00000211678 889 ntBASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-3P97334 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms