Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.68□□□□□ -0.54
SgcbP82349 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SgcbP82349 Gm11425-201ENSMUST00000119608 498 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.68□□□□□ -0.54
SgcbP82349 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gm43818-201ENSMUST00000200605 466 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.68□□□□□ -0.54
SgcbP82349 Gm29705-201ENSMUST00000212598 474 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcbP82349 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
SgcbP82349 Gm9396-201ENSMUST00000076703 567 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Gm25857-201ENSMUST00000082788 129 ntBASIC11.68□□□□□ -0.54
SgcbP82349 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.68□□□□□ -0.54
SgcbP82349 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.67□□□□□ -0.54
SgcbP82349 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SgcbP82349 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.67□□□□□ -0.54
SgcbP82349 Gm13369-201ENSMUST00000119442 987 ntBASIC11.67□□□□□ -0.54
SgcbP82349 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcbP82349 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.67□□□□□ -0.54
SgcbP82349 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcbP82349 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SgcbP82349 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.66□□□□□ -0.54
SgcbP82349 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.66□□□□□ -0.54
SgcbP82349 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.66□□□□□ -0.54
SgcbP82349 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Gm40466-201ENSMUST00000212174 422 ntBASIC11.66□□□□□ -0.54
SgcbP82349 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.66□□□□□ -0.54
SgcbP82349 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms