Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Col8a2P25318 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a2P25318 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a2P25318 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a2P25318 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.91□□□□□ -0.66
Col8a2P25318 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Gm25927-201ENSMUST00000175058 117 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a2P25318 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Gm19309-201ENSMUST00000218295 205 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Snora73a-201ENSMUST00000082453 205 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a2P25318 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a2P25318 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm11591-201ENSMUST00000120063 702 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.9□□□□□ -0.66
Col8a2P25318 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a2P25318 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col8a2P25318 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a2P25318 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.9□□□□□ -0.66
Col8a2P25318 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Col8a2P25318 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a2P25318 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a2P25318 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col8a2P25318 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a2P25318 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a2P25318 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.9□□□□□ -0.67
Col8a2P25318 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms