Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MEP1AP4-201ENST00000423244 1087 ntBASIC18.02■□□□□ 0.48
GGPS1O95749 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.02■□□□□ 0.48
GGPS1O95749 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.02■□□□□ 0.48
GGPS1O95749 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.02■□□□□ 0.48
GGPS1O95749 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.02■□□□□ 0.48
GGPS1O95749 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.02■□□□□ 0.48
GGPS1O95749 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.02■□□□□ 0.48
GGPS1O95749 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.02■□□□□ 0.48
GGPS1O95749 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.02■□□□□ 0.47
GGPS1O95749 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
GGPS1O95749 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
GGPS1O95749 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
GGPS1O95749 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
GGPS1O95749 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GGPS1O95749 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.02■□□□□ 0.47
GGPS1O95749 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
GGPS1O95749 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
GGPS1O95749 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GGPS1O95749 KRT8P37-201ENST00000451609 1420 ntBASIC18.01■□□□□ 0.47
GGPS1O95749 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 EEF1DP4-201ENST00000446006 880 ntBASIC18.01■□□□□ 0.47
GGPS1O95749 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 TIMM17BP1-201ENST00000545713 516 ntBASIC18.01■□□□□ 0.47
GGPS1O95749 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.01■□□□□ 0.47
GGPS1O95749 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.01■□□□□ 0.47
GGPS1O95749 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GGPS1O95749 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.01■□□□□ 0.47
GGPS1O95749 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.01■□□□□ 0.47
GGPS1O95749 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.01■□□□□ 0.47
GGPS1O95749 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GGPS1O95749 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.01■□□□□ 0.47
GGPS1O95749 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18■□□□□ 0.47
GGPS1O95749 INE1-201ENST00000456273 945 ntBASIC18■□□□□ 0.47
GGPS1O95749 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 RN7SL752P-201ENST00000463779 287 ntBASIC18■□□□□ 0.47
GGPS1O95749 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
GGPS1O95749 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
GGPS1O95749 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18■□□□□ 0.47
GGPS1O95749 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18■□□□□ 0.47
GGPS1O95749 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
GGPS1O95749 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms