Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.63■□□□□ 0.25
Ubr1O70481 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 Gm44958-201ENSMUST00000203734 736 ntBASIC16.63■□□□□ 0.25
Ubr1O70481 Gm44100-201ENSMUST00000204329 436 ntBASIC16.63■□□□□ 0.25
Ubr1O70481 Gm8285-201ENSMUST00000208293 759 ntBASIC16.63■□□□□ 0.25
Ubr1O70481 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.63■□□□□ 0.25
Ubr1O70481 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ubr1O70481 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.63■□□□□ 0.25
Ubr1O70481 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ubr1O70481 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ubr1O70481 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.62■□□□□ 0.25
Ubr1O70481 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.62■□□□□ 0.25
Ubr1O70481 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.62■□□□□ 0.25
Ubr1O70481 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.62■□□□□ 0.25
Ubr1O70481 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ubr1O70481 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.62■□□□□ 0.25
Ubr1O70481 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr1O70481 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Ubr1O70481 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubr1O70481 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubr1O70481 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Ubr1O70481 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubr1O70481 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Gm24934-201ENSMUST00000103764 111 ntBASIC16.61■□□□□ 0.25
Ubr1O70481 Mir1943-201ENSMUST00000158276 73 ntBASIC16.61■□□□□ 0.25
Ubr1O70481 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Gm9230-201ENSMUST00000188228 532 ntBASIC16.61■□□□□ 0.25
Ubr1O70481 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.61■□□□□ 0.25
Ubr1O70481 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.61■□□□□ 0.25
Ubr1O70481 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr1O70481 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ubr1O70481 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ubr1O70481 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Gm5525-201ENSMUST00000190438 1312 ntBASIC16.6■□□□□ 0.25
Ubr1O70481 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ubr1O70481 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ubr1O70481 Gm15515-201ENSMUST00000117827 822 ntBASIC16.6■□□□□ 0.25
Ubr1O70481 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubr1O70481 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.6■□□□□ 0.25
Ubr1O70481 Gm20426-201ENSMUST00000173657 440 ntBASIC16.6■□□□□ 0.25
Ubr1O70481 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms