Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.69□□□□□ -0.06
Stx1aO35526 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Stx1aO35526 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Stx1aO35526 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Stx1aO35526 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Stx1aO35526 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Stx1aO35526 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
Stx1aO35526 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.69□□□□□ -0.06
Stx1aO35526 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Pck2-205ENSMUST00000226352 2784 ntBASIC14.69□□□□□ -0.06
Stx1aO35526 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Stx1aO35526 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stx1aO35526 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.68□□□□□ -0.06
Stx1aO35526 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Stx1aO35526 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.68□□□□□ -0.06
Stx1aO35526 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm15376-201ENSMUST00000122258 783 ntBASIC14.68□□□□□ -0.06
Stx1aO35526 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm26464-201ENSMUST00000157094 305 ntBASIC14.68□□□□□ -0.06
Stx1aO35526 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Gm43094-201ENSMUST00000196549 921 ntBASIC14.68□□□□□ -0.06
Stx1aO35526 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Stx1aO35526 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stx1aO35526 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.67□□□□□ -0.06
Stx1aO35526 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.67□□□□□ -0.06
Stx1aO35526 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Stx1aO35526 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Gm13223-201ENSMUST00000118609 747 ntBASIC14.67□□□□□ -0.06
Stx1aO35526 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Stx1aO35526 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Stx1aO35526 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Stx1aO35526 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stx1aO35526 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.67□□□□□ -0.06
Stx1aO35526 Gm2213-201ENSMUST00000197485 688 ntBASIC14.67□□□□□ -0.06
Stx1aO35526 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.67□□□□□ -0.06
Stx1aO35526 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.67□□□□□ -0.06
Stx1aO35526 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stx1aO35526 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms