Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.27□□□□□ -0.45
Colca2F8VPY8 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.27□□□□□ -0.45
Colca2F8VPY8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Gm10076-201ENSMUST00000073238 384 ntBASIC12.27□□□□□ -0.45
Colca2F8VPY8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.27□□□□□ -0.45
Colca2F8VPY8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Colca2F8VPY8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Gm15515-201ENSMUST00000117827 822 ntBASIC12.26□□□□□ -0.45
Colca2F8VPY8 Gm12314-201ENSMUST00000118104 538 ntBASIC12.26□□□□□ -0.45
Colca2F8VPY8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.26□□□□□ -0.45
Colca2F8VPY8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Colca2F8VPY8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.26□□□□□ -0.45
Colca2F8VPY8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.26□□□□□ -0.45
Colca2F8VPY8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Colca2F8VPY8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm12165-201ENSMUST00000117047 342 ntBASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm13035-201ENSMUST00000117496 342 ntBASIC12.25□□□□□ -0.45
Colca2F8VPY8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Gm8194-201ENSMUST00000159783 859 ntBASIC12.25□□□□□ -0.45
Colca2F8VPY8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.25□□□□□ -0.45
Colca2F8VPY8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms