Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Gm28760-201ENSMUST00000185995 736 ntBASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.12□□□□□ -0.31
Gm28043E0CXC2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Gm5279-201ENSMUST00000199575 745 ntBASIC13.12□□□□□ -0.31
Gm28043E0CXC2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm28043E0CXC2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms