Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm9625-201ENSMUST00000180422 955 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm37852-201ENSMUST00000193027 350 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm270-201ENSMUST00000223010 976 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm12337-201ENSMUST00000119634 400 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd6A3KFM7 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.47□□□□□ -0.73
Chd6A3KFM7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.46□□□□□ -0.73
Chd6A3KFM7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Rprl1-201ENSMUST00000158050 327 ntBASIC10.46□□□□□ -0.73
Chd6A3KFM7 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm17827-201ENSMUST00000211825 742 ntBASIC10.46□□□□□ -0.73
Chd6A3KFM7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm5805-201ENSMUST00000072779 456 ntBASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Chd6A3KFM7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm22594-201ENSMUST00000104251 130 ntBASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm6447-201ENSMUST00000118905 835 ntBASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.46□□□□□ -0.74
Chd6A3KFM7 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm5599-201ENSMUST00000209602 788 ntBASIC10.46□□□□□ -0.74
Chd6A3KFM7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms